Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Gm11249-201ENSMUST00000117071 859 ntBASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prdm9Q96EQ9 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prdm9Q96EQ9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prdm9Q96EQ9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prdm9Q96EQ9 Flg-201ENSMUST00000050758 1488 ntBASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prdm9Q96EQ9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Gm5643-201ENSMUST00000117081 966 ntBASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prdm9Q96EQ9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prdm9Q96EQ9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms