Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.67■□□□□ 0.74
Pcdha2Q91Y17 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdha2Q91Y17 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha2Q91Y17 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha2Q91Y17 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Pcdha2Q91Y17 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pcdha2Q91Y17 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha2Q91Y17 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Gm12527-201ENSMUST00000117967 564 ntBASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha2Q91Y17 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Gm20049-201ENSMUST00000219950 730 ntBASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha2Q91Y17 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha2Q91Y17 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha2Q91Y17 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha2Q91Y17 Gm2399-201ENSMUST00000104944 225 ntBASIC19.59■□□□□ 0.73
Pcdha2Q91Y17 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha2Q91Y17 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdha2Q91Y17 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms