Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Gm6365-201ENSMUST00000054711 744 ntBASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha3Q91Y16 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdha3Q91Y16 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdha3Q91Y16 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.19■□□□□ 0.66
Pcdha3Q91Y16 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdha3Q91Y16 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Gm29257-201ENSMUST00000186115 639 ntBASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdha3Q91Y16 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Gm6211-202ENSMUST00000167849 925 ntBASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdha3Q91Y16 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms