Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha9Q91Y11 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdha9Q91Y11 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha9Q91Y11 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Gm26524-201ENSMUST00000192339 390 ntBASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha9Q91Y11 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha9Q91Y11 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdha9Q91Y11 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Rab3c-203ENSMUST00000224180 967 ntBASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha9Q91Y11 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha9Q91Y11 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Gm5408-201ENSMUST00000197998 747 ntBASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdha9Q91Y11 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms