Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhac1Q91Y10 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Gm7860-201ENSMUST00000121190 879 ntBASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhac1Q91Y10 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhac1Q91Y10 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhac1Q91Y10 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhac1Q91Y10 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Grk6-206ENSMUST00000224995 2971 ntBASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhac1Q91Y10 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Pcdhac1Q91Y10 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhac1Q91Y10 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms