Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb6Q91XZ4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Gm22325-201ENSMUST00000158904 308 ntBASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb6Q91XZ4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Pcdhb6Q91XZ4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Gm15039-201ENSMUST00000118914 875 ntBASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhb6Q91XZ4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Gm6365-201ENSMUST00000054711 744 ntBASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb6Q91XZ4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Gm27405-201ENSMUST00000184201 112 ntBASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb6Q91XZ4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb6Q91XZ4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms