Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb8Q91XZ2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb8Q91XZ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb8Q91XZ2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb8Q91XZ2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb8Q91XZ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb8Q91XZ2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Gm10033-202ENSMUST00000211874 928 ntBASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Gm5874-201ENSMUST00000096101 508 ntBASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb8Q91XZ2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb8Q91XZ2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb8Q91XZ2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb8Q91XZ2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms