Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3d19Q91X43 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sh3d19Q91X43 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3d19Q91X43 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Gm5643-201ENSMUST00000117081 966 ntBASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3d19Q91X43 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Flg-201ENSMUST00000050758 1488 ntBASIC19.16■□□□□ 0.66
Sh3d19Q91X43 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3d19Q91X43 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3d19Q91X43 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Sh3d19Q91X43 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Gm11927-201ENSMUST00000118472 759 ntBASIC19.14■□□□□ 0.65
Sh3d19Q91X43 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sh3d19Q91X43 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sh3d19Q91X43 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms