Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
H1fooQ8VIK3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
H1fooQ8VIK3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H1fooQ8VIK3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
H1fooQ8VIK3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Gm13234-201ENSMUST00000120010 747 ntBASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Gm42778-201ENSMUST00000199644 553 ntBASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H1fooQ8VIK3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Gm13146-201ENSMUST00000118508 780 ntBASIC15.4■□□□□ 0.06
H1fooQ8VIK3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
H1fooQ8VIK3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
H1fooQ8VIK3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Gm10493-201ENSMUST00000097270 612 ntBASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
H1fooQ8VIK3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.37■□□□□ 0.05
H1fooQ8VIK3 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.37■□□□□ 0.05
H1fooQ8VIK3 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.37■□□□□ 0.05
H1fooQ8VIK3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Gm13534-201ENSMUST00000121169 513 ntBASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H1fooQ8VIK3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms