Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cspg4Q8VHY0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Gm6443-201ENSMUST00000203599 874 ntBASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Zfp783-201ENSMUST00000095946 670 ntBASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cspg4Q8VHY0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Gm15375-201ENSMUST00000119510 849 ntBASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Gm42545-201ENSMUST00000202755 922 ntBASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Mtag2-201ENSMUST00000058665 714 ntBASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cspg4Q8VHY0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg4Q8VHY0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg4Q8VHY0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Gm25016-201ENSMUST00000158399 131 ntBASIC15.8■□□□□ 0.12
Cspg4Q8VHY0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms