Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpap2Q8VC34 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Mir5133-201ENSMUST00000174955 77 ntBASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rpap2Q8VC34 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpap2Q8VC34 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Gm13148-201ENSMUST00000118892 745 ntBASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rpap2Q8VC34 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpap2Q8VC34 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.15■□□□□ 0.82
Rpap2Q8VC34 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpap2Q8VC34 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Rpap2Q8VC34 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rpap2Q8VC34 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rpap2Q8VC34 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpap2Q8VC34 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms