Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp33Q8R5K2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp33Q8R5K2 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.16■□□□□ 0.98
Usp33Q8R5K2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp33Q8R5K2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Usp33Q8R5K2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp33Q8R5K2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp33Q8R5K2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp33Q8R5K2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Gm43183-201ENSMUST00000200632 547 ntBASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp33Q8R5K2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp33Q8R5K2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Gm30025-201ENSMUST00000218555 728 ntBASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp33Q8R5K2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Usp33Q8R5K2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp33Q8R5K2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp33Q8R5K2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp33Q8R5K2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp33Q8R5K2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp33Q8R5K2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms