Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmn1r28Q8R2C9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.91■□□□□ 0.3
Vmn1r28Q8R2C9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmn1r28Q8R2C9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmn1r28Q8R2C9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vmn1r28Q8R2C9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vmn1r28Q8R2C9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vmn1r28Q8R2C9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vmn1r28Q8R2C9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vmn1r28Q8R2C9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vmn1r28Q8R2C9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vmn1r28Q8R2C9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vmn1r28Q8R2C9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vmn1r28Q8R2C9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Vmn1r28Q8R2C9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vmn1r28Q8R2C9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vmn1r28Q8R2C9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vmn1r28Q8R2C9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms