Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nudcd3Q8R1N4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nudcd3Q8R1N4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nudcd3Q8R1N4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nudcd3Q8R1N4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nudcd3Q8R1N4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nudcd3Q8R1N4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nudcd3Q8R1N4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms