Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Gm7889-201ENSMUST00000185591 958 ntBASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Gm7367-201ENSMUST00000057611 492 ntBASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Gm42545-201ENSMUST00000202755 922 ntBASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shtn1Q8K2Q9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shtn1Q8K2Q9 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Gm6659-201ENSMUST00000174752 547 ntBASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Shtn1Q8K2Q9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shtn1Q8K2Q9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shtn1Q8K2Q9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Gm18025-201ENSMUST00000221733 862 ntBASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shtn1Q8K2Q9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shtn1Q8K2Q9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.64■■□□□ 1.05
Shtn1Q8K2Q9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms