Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cchcr1Q8K2I2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cchcr1Q8K2I2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cchcr1Q8K2I2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Cchcr1Q8K2I2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cchcr1Q8K2I2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.74■■□□□ 1.07
Cchcr1Q8K2I2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Rarb-207ENSMUST00000225921 2756 ntBASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cchcr1Q8K2I2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cchcr1Q8K2I2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cchcr1Q8K2I2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cchcr1Q8K2I2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cchcr1Q8K2I2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms