Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Gm38285-201ENSMUST00000192928 922 ntBASIC20.92■□□□□ 0.94
Syne4Q8CII8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.92■□□□□ 0.94
Syne4Q8CII8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Syne4Q8CII8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Gm12382-201ENSMUST00000122005 922 ntBASIC20.91■□□□□ 0.94
Syne4Q8CII8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.91■□□□□ 0.94
Syne4Q8CII8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Syne4Q8CII8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Syne4Q8CII8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Syne4Q8CII8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Syne4Q8CII8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.89■□□□□ 0.93
Syne4Q8CII8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Syne4Q8CII8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Syne4Q8CII8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Syne4Q8CII8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.87■□□□□ 0.93
Syne4Q8CII8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syne4Q8CII8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syne4Q8CII8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Syne4Q8CII8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.86■□□□□ 0.93
Syne4Q8CII8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Syne4Q8CII8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Syne4Q8CII8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne4Q8CII8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms