Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Smc4Q8CG47 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.67■■□□□ 1.22
Smc4Q8CG47 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.67■■□□□ 1.22
Smc4Q8CG47 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Smc4Q8CG47 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.65■■□□□ 1.22
Smc4Q8CG47 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smc4Q8CG47 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc4Q8CG47 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc4Q8CG47 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc4Q8CG47 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc4Q8CG47 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Smc4Q8CG47 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc4Q8CG47 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC22.64■■□□□ 1.21
Smc4Q8CG47 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Smc4Q8CG47 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Gm13158-201ENSMUST00000122007 736 ntBASIC22.63■■□□□ 1.21
Smc4Q8CG47 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.63■■□□□ 1.21
Smc4Q8CG47 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc4Q8CG47 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Gm11927-201ENSMUST00000118472 759 ntBASIC22.62■■□□□ 1.21
Smc4Q8CG47 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc4Q8CG47 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc4Q8CG47 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.61■■□□□ 1.21
Smc4Q8CG47 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Notumos-201ENSMUST00000151998 2659 ntBASIC22.6■■□□□ 1.21
Smc4Q8CG47 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc4Q8CG47 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms