Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc178Q8CDV0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc178Q8CDV0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc178Q8CDV0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc178Q8CDV0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Gm5408-201ENSMUST00000197998 747 ntBASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc178Q8CDV0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc178Q8CDV0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ccdc178Q8CDV0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc178Q8CDV0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc178Q8CDV0 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.72■■□□□ 1.07
Ccdc178Q8CDV0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms