Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc38Q8CDN8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc38Q8CDN8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ccdc38Q8CDN8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Gm10493-201ENSMUST00000097270 612 ntBASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc38Q8CDN8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ccdc38Q8CDN8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc38Q8CDN8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc38Q8CDN8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc38Q8CDN8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc38Q8CDN8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc38Q8CDN8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms