Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vcpip1Q8CDG3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vcpip1Q8CDG3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Fst-202ENSMUST00000223640 2612 ntBASIC19.72■□□□□ 0.75
Vcpip1Q8CDG3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vcpip1Q8CDG3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vcpip1Q8CDG3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vcpip1Q8CDG3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.68■□□□□ 0.74
Vcpip1Q8CDG3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms