Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd4Q8CC84 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lysmd4Q8CC84 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.49■□□□□ 0.23
Lysmd4Q8CC84 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Gm43137-201ENSMUST00000198052 594 ntBASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lysmd4Q8CC84 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Gm27801-201ENSMUST00000184174 223 ntBASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lysmd4Q8CC84 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd4Q8CC84 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd4Q8CC84 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd4Q8CC84 Smad6-203ENSMUST00000179458 273 ntBASIC16.46■□□□□ 0.23
Lysmd4Q8CC84 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lysmd4Q8CC84 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lysmd4Q8CC84 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lysmd4Q8CC84 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.46■□□□□ 0.22
Lysmd4Q8CC84 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.46■□□□□ 0.22
Lysmd4Q8CC84 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lysmd4Q8CC84 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Gm11421-201ENSMUST00000122124 294 ntBASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Gm8969-201ENSMUST00000199694 526 ntBASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Gm13241-201ENSMUST00000094493 780 ntBASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lysmd4Q8CC84 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms