Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc46a2Q8CA03 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc46a2Q8CA03 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Gm21956-201ENSMUST00000179946 522 ntBASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Gm8969-201ENSMUST00000199694 526 ntBASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc46a2Q8CA03 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc46a2Q8CA03 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Gm12251-201ENSMUST00000117893 792 ntBASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Gm27801-201ENSMUST00000184174 223 ntBASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc46a2Q8CA03 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc46a2Q8CA03 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Gm43137-201ENSMUST00000198052 594 ntBASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc46a2Q8CA03 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc46a2Q8CA03 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms