Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rfx6Q8C7R7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Rfx6Q8C7R7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx6Q8C7R7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx6Q8C7R7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Gm6139-201ENSMUST00000079261 882 ntBASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx6Q8C7R7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx6Q8C7R7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx6Q8C7R7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx6Q8C7R7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms