Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp44Q8C2S0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Usp44Q8C2S0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Usp44Q8C2S0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Usp44Q8C2S0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp44Q8C2S0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Usp44Q8C2S0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Usp44Q8C2S0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Usp44Q8C2S0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Rab3c-203ENSMUST00000224180 967 ntBASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp44Q8C2S0 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usp44Q8C2S0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Usp44Q8C2S0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usp44Q8C2S0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms