Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ptcd1Q8C2E4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ptcd1Q8C2E4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ptcd1Q8C2E4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ptcd1Q8C2E4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ptcd1Q8C2E4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptcd1Q8C2E4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptcd1Q8C2E4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ptcd1Q8C2E4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ptcd1Q8C2E4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ptcd1Q8C2E4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ptcd1Q8C2E4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Gm7367-201ENSMUST00000057611 492 ntBASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ptcd1Q8C2E4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Flg-201ENSMUST00000050758 1488 ntBASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Gm11927-201ENSMUST00000118472 759 ntBASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 AC107452.1-201ENSMUST00000227963 481 ntBASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ptcd1Q8C2E4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ptcd1Q8C2E4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms