Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC25.07■■□□□ 1.6
Cps1Q8C196 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cps1Q8C196 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC25.07■■□□□ 1.6
Cps1Q8C196 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cps1Q8C196 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cps1Q8C196 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cps1Q8C196 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cps1Q8C196 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cps1Q8C196 Gm18688-201ENSMUST00000204695 1859 ntBASIC25.05■■□□□ 1.6
Cps1Q8C196 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cps1Q8C196 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cps1Q8C196 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC25.05■■□□□ 1.6
Cps1Q8C196 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Cps1Q8C196 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Cps1Q8C196 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cps1Q8C196 Gm18959-201ENSMUST00000208954 655 ntBASIC25.04■■□□□ 1.6
Cps1Q8C196 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cps1Q8C196 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cps1Q8C196 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Cps1Q8C196 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cps1Q8C196 Hsf1-207ENSMUST00000228371 2102 ntBASIC25.04■■□□□ 1.6
Cps1Q8C196 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC25.03■■□□□ 1.6
Cps1Q8C196 Gm7367-201ENSMUST00000057611 492 ntBASIC25.03■■□□□ 1.6
Cps1Q8C196 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Cps1Q8C196 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cps1Q8C196 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC25.02■■□□□ 1.6
Cps1Q8C196 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cps1Q8C196 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cps1Q8C196 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cps1Q8C196 Gm23634-201ENSMUST00000175071 91 ntBASIC25.01■■□□□ 1.59
Cps1Q8C196 AC159205.6-201ENSMUST00000224935 887 ntBASIC25.01■■□□□ 1.59
Cps1Q8C196 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cps1Q8C196 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cps1Q8C196 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC25■■□□□ 1.59
Cps1Q8C196 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC25■■□□□ 1.59
Cps1Q8C196 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cps1Q8C196 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cps1Q8C196 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Cps1Q8C196 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cps1Q8C196 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cps1Q8C196 Gm10013-201ENSMUST00000106074 672 ntBASIC24.99■■□□□ 1.59
Cps1Q8C196 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC24.99■■□□□ 1.59
Cps1Q8C196 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
Cps1Q8C196 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cps1Q8C196 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cps1Q8C196 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cps1Q8C196 Gm6345-202ENSMUST00000180900 204 ntBASIC24.98■■□□□ 1.59
Cps1Q8C196 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC24.98■■□□□ 1.59
Cps1Q8C196 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC24.98■■□□□ 1.59
Cps1Q8C196 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Cps1Q8C196 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cps1Q8C196 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cps1Q8C196 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cps1Q8C196 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cps1Q8C196 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cps1Q8C196 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.97■■□□□ 1.59
Cps1Q8C196 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Cps1Q8C196 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC24.96■■□□□ 1.59
Cps1Q8C196 Gm6728-201ENSMUST00000178117 1065 ntBASIC24.96■■□□□ 1.59
Cps1Q8C196 Gm33142-201ENSMUST00000193913 867 ntBASIC24.96■■□□□ 1.59
Cps1Q8C196 Gm45058-201ENSMUST00000205810 766 ntBASIC24.96■■□□□ 1.59
Cps1Q8C196 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC24.96■■□□□ 1.59
Cps1Q8C196 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cps1Q8C196 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cps1Q8C196 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cps1Q8C196 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cps1Q8C196 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC24.95■■□□□ 1.58
Cps1Q8C196 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC24.95■■□□□ 1.58
Cps1Q8C196 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cps1Q8C196 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cps1Q8C196 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Cps1Q8C196 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.58
Cps1Q8C196 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Cps1Q8C196 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cps1Q8C196 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Cps1Q8C196 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms