Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sh3rf2Q8BZT2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.65■□□□□ 0.58
Sh3rf2Q8BZT2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sh3rf2Q8BZT2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sh3rf2Q8BZT2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Sh3rf2Q8BZT2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sh3rf2Q8BZT2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Mir6982-201ENSMUST00000184354 68 ntBASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sh3rf2Q8BZT2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sh3rf2Q8BZT2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sh3rf2Q8BZT2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sh3rf2Q8BZT2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sh3rf2Q8BZT2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms