Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf7Q8BTV2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf7Q8BTV2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf7Q8BTV2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf7Q8BTV2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf7Q8BTV2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.38■□□□□ 0.53
Cpsf7Q8BTV2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.37■□□□□ 0.53
Cpsf7Q8BTV2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf7Q8BTV2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf7Q8BTV2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.34■□□□□ 0.53
Cpsf7Q8BTV2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf7Q8BTV2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf7Q8BTV2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.33■□□□□ 0.52
Cpsf7Q8BTV2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf7Q8BTV2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms