Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cc2d1bQ8BRN9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.36■□□□□ 0.85
Cc2d1bQ8BRN9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cc2d1bQ8BRN9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cc2d1bQ8BRN9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cc2d1bQ8BRN9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cc2d1bQ8BRN9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cc2d1bQ8BRN9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cc2d1bQ8BRN9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cc2d1bQ8BRN9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.3■□□□□ 0.84
Cc2d1bQ8BRN9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cc2d1bQ8BRN9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.28■□□□□ 0.84
Cc2d1bQ8BRN9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms