Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp2bQ8BJF9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Gm43017-201ENSMUST00000198296 752 ntBASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Chmp2bQ8BJF9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp2bQ8BJF9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp2bQ8BJF9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp2bQ8BJF9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp2bQ8BJF9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp2bQ8BJF9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp2bQ8BJF9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp2bQ8BJF9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp2bQ8BJF9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms