Protein–RNA interactions for Protein: Q80W65

Pcsk9, Proprotein convertase subtilisin/kexin type 9, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcsk9Q80W65 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Flg-201ENSMUST00000050758 1488 ntBASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Gm11249-201ENSMUST00000117071 859 ntBASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Pcsk9Q80W65 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Gm5643-201ENSMUST00000117081 966 ntBASIC19.24■□□□□ 0.67
Pcsk9Q80W65 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcsk9Q80W65 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcsk9Q80W65 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Gm18666-201ENSMUST00000190039 958 ntBASIC19.22■□□□□ 0.67
Pcsk9Q80W65 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Gm10812-201ENSMUST00000099864 546 ntBASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Pcsk9Q80W65 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcsk9Q80W65 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcsk9Q80W65 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcsk9Q80W65 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms