Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.63■□□□□ 0.41
Otop1Q80VM9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.63■□□□□ 0.41
Otop1Q80VM9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.63■□□□□ 0.41
Otop1Q80VM9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Gm10231-201ENSMUST00000181584 441 ntBASIC17.62■□□□□ 0.41
Otop1Q80VM9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Gm10175-202ENSMUST00000208752 441 ntBASIC17.62■□□□□ 0.41
Otop1Q80VM9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otop1Q80VM9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.61■□□□□ 0.41
Otop1Q80VM9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otop1Q80VM9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.61■□□□□ 0.41
Otop1Q80VM9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.61■□□□□ 0.41
Otop1Q80VM9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Otop1Q80VM9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.6■□□□□ 0.41
Otop1Q80VM9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Otop1Q80VM9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.6■□□□□ 0.41
Otop1Q80VM9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Otop1Q80VM9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.59■□□□□ 0.41
Otop1Q80VM9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Otop1Q80VM9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Otop1Q80VM9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Otop1Q80VM9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.57■□□□□ 0.4
Otop1Q80VM9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms