Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rpp38Q80UU2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Gm12933-201ENSMUST00000120203 872 ntBASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpp38Q80UU2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpp38Q80UU2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Gm13148-201ENSMUST00000118892 745 ntBASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpp38Q80UU2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpp38Q80UU2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Mir5133-201ENSMUST00000174955 77 ntBASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpp38Q80UU2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpp38Q80UU2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpp38Q80UU2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms