Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gm11249-201ENSMUST00000117071 859 ntBASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gm6433-201ENSMUST00000118634 875 ntBASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gm27741-201ENSMUST00000185060 237 ntBASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gm38205-201ENSMUST00000192243 258 ntBASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Gm2559-201ENSMUST00000201323 363 ntBASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.16■□□□□ 0.66
Prpf38bQ80SY5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Gm43799-201ENSMUST00000201845 579 ntBASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf38bQ80SY5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf38bQ80SY5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf38bQ80SY5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf38bQ80SY5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf38bQ80SY5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf38bQ80SY5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms