Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pif1Q80SX8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.91■□□□□ 0.3
Pif1Q80SX8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.91■□□□□ 0.3
Pif1Q80SX8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.91■□□□□ 0.3
Pif1Q80SX8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.91■□□□□ 0.3
Pif1Q80SX8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pif1Q80SX8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.9■□□□□ 0.3
Pif1Q80SX8 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.9■□□□□ 0.3
Pif1Q80SX8 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.9■□□□□ 0.3
Pif1Q80SX8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pif1Q80SX8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pif1Q80SX8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pif1Q80SX8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
Pif1Q80SX8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pif1Q80SX8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.88■□□□□ 0.29
Pif1Q80SX8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.88■□□□□ 0.29
Pif1Q80SX8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.88■□□□□ 0.29
Pif1Q80SX8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pif1Q80SX8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Mir1199-201ENSMUST00000117015 119 ntBASIC16.87■□□□□ 0.29
Pif1Q80SX8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.87■□□□□ 0.29
Pif1Q80SX8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pif1Q80SX8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pif1Q80SX8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms