Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm8Q6ZWM4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm8Q6ZWM4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm8Q6ZWM4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm8Q6ZWM4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm8Q6ZWM4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm8Q6ZWM4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.27■□□□□ 0.67
Lsm8Q6ZWM4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Gm6211-202ENSMUST00000167849 925 ntBASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Lsm8Q6ZWM4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Gm7291-201ENSMUST00000199147 382 ntBASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm8Q6ZWM4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lsm8Q6ZWM4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lsm8Q6ZWM4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm8Q6ZWM4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm8Q6ZWM4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lsm8Q6ZWM4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms