Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Kdm1aQ6ZQ88 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm1aQ6ZQ88 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Grk6-206ENSMUST00000224995 2971 ntBASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.33■□□□□ 0.85
Kdm1aQ6ZQ88 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Kdm1aQ6ZQ88 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm1aQ6ZQ88 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Kdm1aQ6ZQ88 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm1aQ6ZQ88 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm1aQ6ZQ88 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm1aQ6ZQ88 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms