Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn10aQ6QIY3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn10aQ6QIY3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn10aQ6QIY3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn10aQ6QIY3 AA414768-201ENSMUST00000121924 1257 ntBASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn10aQ6QIY3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn10aQ6QIY3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn10aQ6QIY3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn10aQ6QIY3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn10aQ6QIY3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scn10aQ6QIY3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Golph3-202ENSMUST00000226517 2359 ntBASIC21.01■□□□□ 0.95
Scn10aQ6QIY3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn10aQ6QIY3 Gm18688-201ENSMUST00000204695 1859 ntBASIC21■□□□□ 0.95
Scn10aQ6QIY3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms