Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smarcd3Q6P9Z1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Gm27454-201ENSMUST00000185090 204 ntBASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smarcd3Q6P9Z1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smarcd3Q6P9Z1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smarcd3Q6P9Z1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Gm26833-201ENSMUST00000180899 440 ntBASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Gm6139-201ENSMUST00000079261 882 ntBASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcd3Q6P9Z1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Gm40848-201ENSMUST00000221998 324 ntBASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcd3Q6P9Z1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcd3Q6P9Z1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms