Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Usp50Q6P8X6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Gm11249-201ENSMUST00000117071 859 ntBASIC21.24■□□□□ 0.99
Usp50Q6P8X6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usp50Q6P8X6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Gm13168-201ENSMUST00000121771 632 ntBASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Usp50Q6P8X6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Usp50Q6P8X6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp50Q6P8X6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.2■□□□□ 0.99
Usp50Q6P8X6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp50Q6P8X6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.19■□□□□ 0.98
Usp50Q6P8X6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Gm22325-201ENSMUST00000158904 308 ntBASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Gm22240-201ENSMUST00000175225 82 ntBASIC21.19■□□□□ 0.98
Usp50Q6P8X6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp50Q6P8X6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp50Q6P8X6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp50Q6P8X6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp50Q6P8X6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp50Q6P8X6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.17■□□□□ 0.98
Usp50Q6P8X6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp50Q6P8X6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp50Q6P8X6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms