Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hdac4Q6NZM9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac4Q6NZM9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac4Q6NZM9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac4Q6NZM9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac4Q6NZM9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Hdac4Q6NZM9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Gm22325-201ENSMUST00000158904 308 ntBASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac4Q6NZM9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac4Q6NZM9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac4Q6NZM9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac4Q6NZM9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms