Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.32■□□□□ 0.84
Krt39Q6IFX4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Krt39Q6IFX4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krt39Q6IFX4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
Krt39Q6IFX4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krt39Q6IFX4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krt39Q6IFX4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt39Q6IFX4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Gm43060-201ENSMUST00000200621 289 ntBASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt39Q6IFX4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms