Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
AtmQ62388 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AtmQ62388 Gm18025-201ENSMUST00000221733 862 ntBASIC17.53■□□□□ 0.4
AtmQ62388 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AtmQ62388 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AtmQ62388 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.52■□□□□ 0.4
AtmQ62388 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AtmQ62388 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AtmQ62388 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AtmQ62388 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AtmQ62388 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AtmQ62388 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AtmQ62388 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AtmQ62388 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AtmQ62388 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AtmQ62388 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.51■□□□□ 0.39
AtmQ62388 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
AtmQ62388 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AtmQ62388 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.51■□□□□ 0.39
AtmQ62388 Gm17661-201ENSMUST00000170317 270 ntBASIC17.51■□□□□ 0.39
AtmQ62388 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.51■□□□□ 0.39
AtmQ62388 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.5■□□□□ 0.39
AtmQ62388 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.5■□□□□ 0.39
AtmQ62388 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Flg-201ENSMUST00000050758 1488 ntBASIC17.5■□□□□ 0.39
AtmQ62388 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AtmQ62388 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AtmQ62388 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
AtmQ62388 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AtmQ62388 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.5■□□□□ 0.39
AtmQ62388 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AtmQ62388 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AtmQ62388 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AtmQ62388 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AtmQ62388 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AtmQ62388 Gm15375-201ENSMUST00000119510 849 ntBASIC17.49■□□□□ 0.39
AtmQ62388 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AtmQ62388 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AtmQ62388 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AtmQ62388 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.48■□□□□ 0.39
AtmQ62388 Gm43183-201ENSMUST00000200632 547 ntBASIC17.48■□□□□ 0.39
AtmQ62388 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
AtmQ62388 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.48■□□□□ 0.39
AtmQ62388 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AtmQ62388 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AtmQ62388 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.48■□□□□ 0.39
AtmQ62388 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.47■□□□□ 0.39
AtmQ62388 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
AtmQ62388 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AtmQ62388 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AtmQ62388 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AtmQ62388 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AtmQ62388 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
AtmQ62388 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
AtmQ62388 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
AtmQ62388 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.45■□□□□ 0.38
AtmQ62388 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.45■□□□□ 0.38
AtmQ62388 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.45■□□□□ 0.38
AtmQ62388 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
AtmQ62388 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Gm7153-201ENSMUST00000117092 455 ntBASIC17.45■□□□□ 0.38
AtmQ62388 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.45■□□□□ 0.38
AtmQ62388 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AtmQ62388 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms