Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.98■□□□□ 0.47
Six3Q62233 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.98■□□□□ 0.47
Six3Q62233 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Six3Q62233 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Six3Q62233 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Six3Q62233 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six3Q62233 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.97■□□□□ 0.47
Six3Q62233 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.97■□□□□ 0.47
Six3Q62233 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Fst-202ENSMUST00000223640 2612 ntBASIC17.97■□□□□ 0.47
Six3Q62233 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Six3Q62233 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Six3Q62233 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.97■□□□□ 0.47
Six3Q62233 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six3Q62233 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.96■□□□□ 0.47
Six3Q62233 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.96■□□□□ 0.47
Six3Q62233 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.96■□□□□ 0.47
Six3Q62233 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Six3Q62233 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Six3Q62233 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six3Q62233 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Six3Q62233 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Gm13534-201ENSMUST00000121169 513 ntBASIC17.95■□□□□ 0.46
Six3Q62233 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.95■□□□□ 0.46
Six3Q62233 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Six3Q62233 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Six3Q62233 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.95■□□□□ 0.46
Six3Q62233 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six3Q62233 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.94■□□□□ 0.46
Six3Q62233 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Six3Q62233 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six3Q62233 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 Gm13234-201ENSMUST00000120010 747 ntBASIC17.94■□□□□ 0.46
Six3Q62233 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six3Q62233 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
Six3Q62233 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six3Q62233 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Six3Q62233 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
Six3Q62233 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Six3Q62233 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six3Q62233 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.92■□□□□ 0.46
Six3Q62233 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Six3Q62233 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Six3Q62233 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six3Q62233 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Six3Q62233 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.91■□□□□ 0.46
Six3Q62233 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms