Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.66■□□□□ 0.74
Six2Q62232 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.66■□□□□ 0.74
Six2Q62232 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six2Q62232 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Six2Q62232 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Six2Q62232 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Six2Q62232 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Six2Q62232 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six2Q62232 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six2Q62232 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six2Q62232 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six2Q62232 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Six2Q62232 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six2Q62232 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Six2Q62232 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six2Q62232 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six2Q62232 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six2Q62232 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.63■□□□□ 0.73
Six2Q62232 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Six2Q62232 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six2Q62232 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
Six2Q62232 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.62■□□□□ 0.73
Six2Q62232 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.62■□□□□ 0.73
Six2Q62232 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.62■□□□□ 0.73
Six2Q62232 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six2Q62232 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Six2Q62232 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.61■□□□□ 0.73
Six2Q62232 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Six2Q62232 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.61■□□□□ 0.73
Six2Q62232 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six2Q62232 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.6■□□□□ 0.73
Six2Q62232 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Six2Q62232 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.6■□□□□ 0.73
Six2Q62232 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.6■□□□□ 0.73
Six2Q62232 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Six2Q62232 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six2Q62232 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Six2Q62232 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.59■□□□□ 0.73
Six2Q62232 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Six2Q62232 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Six2Q62232 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.59■□□□□ 0.73
Six2Q62232 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Six2Q62232 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Six2Q62232 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Six2Q62232 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Six2Q62232 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms