Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn9aQ62205 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Scn9aQ62205 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.91■■□□□ 1.1
Scn9aQ62205 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn9aQ62205 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.9■■□□□ 1.1
Scn9aQ62205 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.9■■□□□ 1.1
Scn9aQ62205 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Scn9aQ62205 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Scn9aQ62205 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn9aQ62205 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn9aQ62205 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scn9aQ62205 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.89■■□□□ 1.1
Scn9aQ62205 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Scn9aQ62205 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.89■■□□□ 1.09
Scn9aQ62205 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn9aQ62205 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn9aQ62205 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn9aQ62205 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Scn9aQ62205 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Scn9aQ62205 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Golph3-202ENSMUST00000226517 2359 ntBASIC21.88■■□□□ 1.09
Scn9aQ62205 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Scn9aQ62205 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 AA414768-201ENSMUST00000121924 1257 ntBASIC21.88■■□□□ 1.09
Scn9aQ62205 Ank2-226ENSMUST00000189368 339 ntBASIC21.88■■□□□ 1.09
Scn9aQ62205 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Scn9aQ62205 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn9aQ62205 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn9aQ62205 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn9aQ62205 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scn9aQ62205 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scn9aQ62205 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn9aQ62205 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.87■■□□□ 1.09
Scn9aQ62205 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn9aQ62205 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Scn9aQ62205 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Scn9aQ62205 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn9aQ62205 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn9aQ62205 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn9aQ62205 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.86■■□□□ 1.09
Scn9aQ62205 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.86■■□□□ 1.09
Scn9aQ62205 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.86■■□□□ 1.09
Scn9aQ62205 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn9aQ62205 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Scn9aQ62205 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn9aQ62205 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn9aQ62205 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.85■■□□□ 1.09
Scn9aQ62205 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.84■■□□□ 1.09
Scn9aQ62205 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Scn9aQ62205 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn9aQ62205 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn9aQ62205 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn9aQ62205 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn9aQ62205 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Scn9aQ62205 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.83■■□□□ 1.09
Scn9aQ62205 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn9aQ62205 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Scn9aQ62205 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Scn9aQ62205 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn9aQ62205 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn9aQ62205 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Scn9aQ62205 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scn9aQ62205 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn9aQ62205 Gm9103-201ENSMUST00000119371 405 ntBASIC21.82■■□□□ 1.08
Scn9aQ62205 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn9aQ62205 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.82■■□□□ 1.08
Scn9aQ62205 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn9aQ62205 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn9aQ62205 Gm38285-201ENSMUST00000192928 922 ntBASIC21.81■■□□□ 1.08
Scn9aQ62205 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.81■■□□□ 1.08
Scn9aQ62205 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.81■■□□□ 1.08
Scn9aQ62205 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn9aQ62205 Mir6349-201ENSMUST00000184059 97 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms