Protein–RNA interactions for Protein: Q62186

Ssr4, Translocon-associated protein subunit delta, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4Q62186 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr4Q62186 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Ssr4Q62186 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.81■□□□□ 0.6
Ssr4Q62186 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr4Q62186 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssr4Q62186 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr4Q62186 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ssr4Q62186 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssr4Q62186 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ssr4Q62186 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.8■□□□□ 0.6
Ssr4Q62186 Gm11539-201ENSMUST00000119837 557 ntBASIC18.8■□□□□ 0.6
Ssr4Q62186 Gm13436-201ENSMUST00000120418 567 ntBASIC18.8■□□□□ 0.6
Ssr4Q62186 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Gm3375-201ENSMUST00000203929 796 ntBASIC18.8■□□□□ 0.6
Ssr4Q62186 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Ssr4Q62186 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr4Q62186 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ssr4Q62186 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr4Q62186 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.79■□□□□ 0.6
Ssr4Q62186 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr4Q62186 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr4Q62186 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr4Q62186 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr4Q62186 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ssr4Q62186 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr4Q62186 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssr4Q62186 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssr4Q62186 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr4Q62186 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssr4Q62186 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ssr4Q62186 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr4Q62186 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Ssr4Q62186 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ssr4Q62186 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ssr4Q62186 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.77■□□□□ 0.6
Ssr4Q62186 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.77■□□□□ 0.6
Ssr4Q62186 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.77■□□□□ 0.6
Ssr4Q62186 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr4Q62186 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.59
Ssr4Q62186 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ssr4Q62186 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssr4Q62186 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ssr4Q62186 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Gm7889-201ENSMUST00000185591 958 ntBASIC18.76■□□□□ 0.59
Ssr4Q62186 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr4Q62186 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ssr4Q62186 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssr4Q62186 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.75■□□□□ 0.59
Ssr4Q62186 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssr4Q62186 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr4Q62186 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr4Q62186 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr4Q62186 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr4Q62186 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssr4Q62186 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms