Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rai1Q61818 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
Rai1Q61818 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.86■□□□□ 0.45
Rai1Q61818 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rai1Q61818 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.86■□□□□ 0.45
Rai1Q61818 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.86■□□□□ 0.45
Rai1Q61818 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.86■□□□□ 0.45
Rai1Q61818 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rai1Q61818 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rai1Q61818 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rai1Q61818 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rai1Q61818 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rai1Q61818 Gm13559-201ENSMUST00000120476 863 ntBASIC17.85■□□□□ 0.45
Rai1Q61818 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.85■□□□□ 0.45
Rai1Q61818 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rai1Q61818 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.85■□□□□ 0.45
Rai1Q61818 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.85■□□□□ 0.45
Rai1Q61818 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rai1Q61818 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rai1Q61818 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rai1Q61818 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Gm38285-201ENSMUST00000192928 922 ntBASIC17.84■□□□□ 0.45
Rai1Q61818 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rai1Q61818 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.84■□□□□ 0.45
Rai1Q61818 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rai1Q61818 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rai1Q61818 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rai1Q61818 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rai1Q61818 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.83■□□□□ 0.44
Rai1Q61818 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rai1Q61818 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rai1Q61818 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rai1Q61818 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rai1Q61818 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rai1Q61818 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.82■□□□□ 0.44
Rai1Q61818 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.82■□□□□ 0.44
Rai1Q61818 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.82■□□□□ 0.44
Rai1Q61818 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.82■□□□□ 0.44
Rai1Q61818 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.82■□□□□ 0.44
Rai1Q61818 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rai1Q61818 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.81■□□□□ 0.44
Rai1Q61818 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rai1Q61818 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rai1Q61818 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rai1Q61818 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.81■□□□□ 0.44
Rai1Q61818 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Mir6349-201ENSMUST00000184059 97 ntBASIC17.8■□□□□ 0.44
Rai1Q61818 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.8■□□□□ 0.44
Rai1Q61818 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rai1Q61818 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
Rai1Q61818 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms