Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sim2Q61079 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Sim2Q61079 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sim2Q61079 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sim2Q61079 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sim2Q61079 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.97■□□□□ 0.47
Sim2Q61079 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.97■□□□□ 0.47
Sim2Q61079 Zfp783-201ENSMUST00000095946 670 ntBASIC17.97■□□□□ 0.47
Sim2Q61079 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sim2Q61079 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.96■□□□□ 0.47
Sim2Q61079 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sim2Q61079 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.96■□□□□ 0.47
Sim2Q61079 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.96■□□□□ 0.47
Sim2Q61079 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.96■□□□□ 0.47
Sim2Q61079 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.96■□□□□ 0.47
Sim2Q61079 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sim2Q61079 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.96■□□□□ 0.46
Sim2Q61079 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Sim2Q61079 Gm15375-201ENSMUST00000119510 849 ntBASIC17.95■□□□□ 0.46
Sim2Q61079 Gm23634-201ENSMUST00000175071 91 ntBASIC17.95■□□□□ 0.46
Sim2Q61079 Gm3375-201ENSMUST00000203929 796 ntBASIC17.95■□□□□ 0.46
Sim2Q61079 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sim2Q61079 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sim2Q61079 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.94■□□□□ 0.46
Sim2Q61079 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sim2Q61079 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sim2Q61079 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Sim2Q61079 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sim2Q61079 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.93■□□□□ 0.46
Sim2Q61079 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.93■□□□□ 0.46
Sim2Q61079 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.93■□□□□ 0.46
Sim2Q61079 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sim2Q61079 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Sim2Q61079 Gm18959-201ENSMUST00000208954 655 ntBASIC17.92■□□□□ 0.46
Sim2Q61079 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sim2Q61079 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sim2Q61079 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.91■□□□□ 0.46
Sim2Q61079 Gm10013-201ENSMUST00000106074 672 ntBASIC17.91■□□□□ 0.46
Sim2Q61079 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sim2Q61079 Gm12382-201ENSMUST00000122005 922 ntBASIC17.91■□□□□ 0.46
Sim2Q61079 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.91■□□□□ 0.46
Sim2Q61079 Gm37292-201ENSMUST00000192062 758 ntBASIC17.91■□□□□ 0.46
Sim2Q61079 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.91■□□□□ 0.46
Sim2Q61079 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms